Submitted: 20 September, 2013. Accepted: 24 October, 2013. This paper presents a study of the effect of solvent-filled cavities and Stern layers in a biomolecular electrostatics solver based on a boundary integral formulation. The tool for this study was the PyGBe code: a solver for biomolecular electrostatics using Python, GPUs and boundary elements. To determine... Continue »
Vorticity field of the flow around a flapping elliptical airfoil, computed with cuIBM.
Close-up of the surface mesh on a lysozyme molecule, showing the surface charge obtained with PyGBe.