Lorena A. Barba group

Loading...

@gabrielweymouth I use the journal's style class, if available, but it's still the author-prepared manuscript, not journal typeset version. View // Reply // Retweet // Like

Accepted: Biomolecular electrostatics solver using Python and GPUs

Submitted: 20 September, 2013. Accepted: 24 October, 2013. This paper presents a study of the effect of solvent-filled cavities and Stern layers in a biomolecular electrostatics solver based on a boundary integral formulation. The tool for this study was the PyGBe code: a solver for biomolecular electrostatics using Python, GPUs and boundary elements. To determine... Continue »

CFD Python: 12 steps to Navier-Stokes

Lorena Barba

We announce the public release of online educational materials for self-learners of CFD using IPython Notebooks: the CFD Python Class! Update! (Jan.2014) CFD Python has a new home on GitHub Some background This post describes the first practical module of Prof. Barba's Computational Fluid Dynamics class, as taught between 2010 and 2013 at Boston University. The... Continue »

Introduction to Parallel Programming course by @jowens and @davedotluebke started today! They like the chickens. https://t.co/3x38bob3 #GPU View // Reply // Retweet // Like

PyGBe code for Poisson-Boltzmann equations

Close-up of the surface mesh on a lysozyme molecule, showing the surface charge obtained with PyGBe.