Lorena A. Barba group

2011

View all publications as a chronological list

All Publications

  • "How to obtain efficient GPU kernels: an illustration using FMM & FGT", Felipe A. Cruz, Simon K. Layton, L. A. Barba. Comput. Phys. Commun., 182(10):2084–2098 (October 2011). 10.1016/j.cpc.2011.05.002 // Preprint arXiv:1009.3457
  • "Biomolecular electrostatics using a fast multipole BEM on up to 512 GPUs and a billion unknowns", Rio Yokota, J. P. Bardhan, M. G. Knepley, L. A. Barba, T. Hamada. Comput. Phys. Commun., 182(6):1271–1283 (June 2011). 10.1016/j.cpc.2011.02.013 // Preprint arXiv:1007.4591
  • "Comparing the treecode with FMM on GPUs for vortex particle simulations of a leapfrogging vortex ring", Rio Yokota, L. A. Barba. Computers & Fluids, 45(1):155–161 (June 2011). 10.1016/j.compfluid.2010.11.029
  • "Treecode and fast multipole method for N-body simulation with CUDA", Rio Yokota, L. A. Barba. (2011). 10.1016/B978-0-12-384988-5.00009-7 // Preprint arXiv:1010.1482

    Ch. 9 in GPU Computing Gems Emerald Edition, Wen-mei Hwu, ed.; Morgan Kaufmann/Elsevier (2011) pp. 113–132. ISBN: 978-0-12-384988-5

  • "Parameter tuning of a hybrid treecode-FMM on GPUs", Rio Yokota, L. A. Barba. (31 May–4 June 2011).

    In CACHES’11: Characterizing Applications for Heterogeneous Exascale Systems, at the 25th International Conference on Supercomputing (ACM/SIGARCH), Tucson, Arizona

  • "Fast multipole method vs. spectral methods for the simulation of isotropic turbulence on GPUs", Rio Yokota, L. A. Barba. 23rd International Conference on Parallel Computational Fluid Dynamics, ParCFD’11 (16–20 May 2011), Barcelona, Spain.
  • "cuIBM—A GPU accelerated immersed boundary method", Simon K. Layton, Anush Krishnan, L. A. Barba. 23rd International Conference on Parallel Computational Fluid Dynamics, ParCFD’11 (16–20 May 2011), Barcelona, Spain. // Code repository //
  • Invited: "Dare to think about exascale CFD — a research agenda", L. A. Barba. 23rd International Conference on Parallel Computational Fluid Dynamics, ParCFD’11 (16–20 May 2011), Barcelona, Spain.

    Plenary lecture

  • Invited: "The basis and perspectives of an exascale algorithm: our ExaFMM project", L. A. Barba. Workshop on Manycore and Accelerator-based High-performance Scientific Computing organized by International Center for Computational Science (ICCS), UC Berkeley (26–28 January 2011), Berkeley, CA.
  • Invited: "The basis and perspectives of an exascale algorithm: our ExaFMM project", L. A. Barba. IMA workshop on High-performance Computing and Emerging Architectures organized by University of Minnesota (10–14 January 2011). // Slides and video on the IMA site
  • "PetFMM–A dynamically load-balancing parallel fast multipole library", Felipe A. Cruz, Matthew G. Knepley, L. A. Barba. Int. J. Num. Meth. Eng., 85(4):403–428 (January 2011). 10.1002/nme.2972 // Preprint arXiv:0905.2637

Refereed Journal Articles

  • "How to obtain efficient GPU kernels: an illustration using FMM & FGT", Felipe A. Cruz, Simon K. Layton, L. A. Barba. Comput. Phys. Commun., 182(10):2084–2098 (October 2011). 10.1016/j.cpc.2011.05.002 // Preprint arXiv:1009.3457
  • "Biomolecular electrostatics using a fast multipole BEM on up to 512 GPUs and a billion unknowns", Rio Yokota, J. P. Bardhan, M. G. Knepley, L. A. Barba, T. Hamada. Comput. Phys. Commun., 182(6):1271–1283 (June 2011). 10.1016/j.cpc.2011.02.013 // Preprint arXiv:1007.4591
  • "Comparing the treecode with FMM on GPUs for vortex particle simulations of a leapfrogging vortex ring", Rio Yokota, L. A. Barba. Computers & Fluids, 45(1):155–161 (June 2011). 10.1016/j.compfluid.2010.11.029
  • "PetFMM–A dynamically load-balancing parallel fast multipole library", Felipe A. Cruz, Matthew G. Knepley, L. A. Barba. Int. J. Num. Meth. Eng., 85(4):403–428 (January 2011). 10.1002/nme.2972 // Preprint arXiv:0905.2637

Book Chapters

Refereed Conference Papers

  • "Parameter tuning of a hybrid treecode-FMM on GPUs", Rio Yokota, L. A. Barba. (31 May–4 June 2011).

    In CACHES’11: Characterizing Applications for Heterogeneous Exascale Systems, at the 25th International Conference on Supercomputing (ACM/SIGARCH), Tucson, Arizona

Conference Presentations

  • "Fast multipole method vs. spectral methods for the simulation of isotropic turbulence on GPUs", Rio Yokota, L. A. Barba. 23rd International Conference on Parallel Computational Fluid Dynamics, ParCFD’11 (16–20 May 2011), Barcelona, Spain.
  • "cuIBM—A GPU accelerated immersed boundary method", Simon K. Layton, Anush Krishnan, L. A. Barba. 23rd International Conference on Parallel Computational Fluid Dynamics, ParCFD’11 (16–20 May 2011), Barcelona, Spain. // Code repository //
  • Invited: "Dare to think about exascale CFD — a research agenda", L. A. Barba. 23rd International Conference on Parallel Computational Fluid Dynamics, ParCFD’11 (16–20 May 2011), Barcelona, Spain.

    Plenary lecture

  • Invited: "The basis and perspectives of an exascale algorithm: our ExaFMM project", L. A. Barba. Workshop on Manycore and Accelerator-based High-performance Scientific Computing organized by International Center for Computational Science (ICCS), UC Berkeley (26–28 January 2011), Berkeley, CA.
  • Invited: "The basis and perspectives of an exascale algorithm: our ExaFMM project", L. A. Barba. IMA workshop on High-performance Computing and Emerging Architectures organized by University of Minnesota (10–14 January 2011). // Slides and video on the IMA site